XCL2

Protein-coding gene in the species Homo sapiens
XCL2
Identifiers
AliasesXCL2, SCM-1b, SCM1B, SCYC2, chemokine (C motif) ligand 2, X-C motif chemokine ligand 2
External IDsOMIM: 604828 MGI: 104593 HomoloGene: 130513 GeneCards: XCL2
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for XCL2
Genomic location for XCL2
Band1q24.2Start168,540,768 bp[1]
End168,543,997 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for XCL2
Genomic location for XCL2
Band1 H2.2|1 72.26 cMStart164,759,213 bp[2]
End164,763,096 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • spleen

  • blood

  • lymph node

  • bone marrow

  • duodenum

  • appendix

  • placenta

  • right lobe of liver

  • smooth muscle tissue

  • gallbladder
Top expressed in
  • thymus

  • spleen

  • blood

  • secondary oocyte

  • jejunum

  • uterus

  • zone of skin

  • white adipose tissue

  • skin of abdomen

  • bone marrow
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • cytokine activity
  • protein binding
  • CCR chemokine receptor binding
  • chemokine activity
Cellular component
  • extracellular region
  • extracellular space
Biological process
  • monocyte chemotaxis
  • chemokine-mediated signaling pathway
  • cellular response to tumor necrosis factor
  • blood circulation
  • neutrophil chemotaxis
  • chemotaxis
  • positive regulation of GTPase activity
  • cellular response to interleukin-1
  • immune response
  • positive regulation of ERK1 and ERK2 cascade
  • cellular response to interferon-gamma
  • lymphocyte chemotaxis
  • inflammatory response
  • signal transduction
  • regulation of signaling receptor activity
  • G protein-coupled receptor signaling pathway
  • positive regulation of T cell chemotaxis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6846

16963

Ensembl

ENSG00000143185

ENSMUSG00000026573

UniProt

Q9UBD3

P47993

RefSeq (mRNA)

NM_003175

NM_008510

RefSeq (protein)

NP_003166

NP_032536

Location (UCSC)Chr 1: 168.54 – 168.54 MbChr 1: 164.76 – 164.76 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Chemokine (C motif) ligand 2 (XCL2) is a small cytokine belonging to the XC chemokine family that is highly related to another chemokine called XCL1.[5] It is predominantly expressed in activated T cells, but can also be found at low levels in unstimulated cells. XCL2 induces chemotaxis of cells expressing the chemokine receptor XCR1.[6] Its gene is located on chromosome 1 in humans.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000143185 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026573 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Kennedy J, Kelner G, Kleyensteuber S, Schall T, Weiss M, Yssel H, Schneider P, Cocks B, Bacon K, Zlotnik A (1995). "Molecular cloning and functional characterization of human lymphotactin". J Immunol. 155 (1): 203–9. doi:10.4049/jimmunol.155.1.203. PMID 7602097.
  6. ^ Yoshida T, Imai T, Kakizaki M, Nishimura M, Takagi S, Yoshie O (1998). "Identification of single C motif-1/lymphotactin receptor XCR1". J Biol Chem. 273 (26): 16551–4. doi:10.1074/jbc.273.26.16551. PMID 9632725.
  7. ^ Yoshida T, Imai T, Takagi S, Nishimura M, Ishikawa I, Yaoi T, Yoshie O (1996). "Structure and expression of two highly related genes encoding SCM-1/human lymphotactin". FEBS Lett. 395 (1): 82–8. doi:10.1016/0014-5793(96)01004-6. PMID 8849694.
  • v
  • t
  • e
By family
Chemokine
CCL
CXCL
CX3CL
XCL
TNF
Interleukin
Type I
(grouped by
receptor
subunit)
γ chain
β chain
IL6 like/gp130
IL12 family/IL12RB1
Other
Type II
IL10 family
Interferon
I
II
Ig superfamily
IL17 family
Other
By function/
cell
  • v
  • t
  • e
CC
CCR1
CCR2
CCR3
CCR4
CCR5
CCR6
CCR7
CCR8
CCR9
CCR10
CCR11
Ungrouped
CXC
CXCR1
(IL-8Rα)
  • Antagonists: Navarixin
  • NAMs: Ladarixin
  • Reparixin (repertaxin)
CXCR2
(IL-8Rβ)
  • Antagonists: Danirixin
  • Elubrixin
  • Navarixin
  • NAMs: Ladarixin
  • Reparixin (repertaxin)
CXCR3
CXCR4
CXCR5
CXCR6
CXCR7
C (XC)
XCR1
CX3C
CX3CR1
Others
CCBP2
CMKLR1